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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
251
gene expression
184
accessible chromatin
124
target gene predictions
98
candidate regulatory elements
92
differential activity
52
chromatin state
46
binding sites
41
variant allelic effects
28
histone modifications
2
caQTL
1
eQTL
Date released
197
February, 2021
155
September, 2023
148
September, 2022
127
November, 2021
68
February, 2024
38
March, 2023
35
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
14
January, 2020
8
February, 2020
7
April, 2020
7
October, 2022
6
August, 2018
6
March, 2020
6
November, 2022
5
October, 2019
3
August, 2017
2
February, 2023
2
May, 2022
1
July, 2020
1
November, 2019
Available data
521
bed bed3+
322
tsv
155
bigWig
78
txt
49
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
919
Homo sapiens
Biosample type
819
primary cell
tissue
74
cell line
26
in vitro differentiated cells
Organ
888
epithelium
363
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
608
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
572
hg19
227
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
919 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
caQTL
eQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
1
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 146 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
1
2
2
1
1
1
SW480
1
1
2
1
1
1
HCT116
3
2
1
HCT-116 cell
1
1
2
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
See all biosamples
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