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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
243
gene expression
171
accessible chromatin
116
target gene predictions
92
differential activity
87
candidate regulatory elements
48
chromatin state
41
variant allelic effects
38
binding sites
23
histone modifications
2
caQTL
1
eQTL
Date released
178
February, 2021
155
September, 2023
136
September, 2022
127
November, 2021
60
February, 2024
38
March, 2023
31
May, 2021
23
August, 2021
20
January, 2021
18
June, 2020
15
May, 2020
14
January, 2020
8
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
February, 2023
2
May, 2022
1
July, 2020
1
November, 2019
Available data
476
bed bed3+
314
tsv
153
bigWig
78
txt
45
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
862
Homo sapiens
Biosample type
819
primary cell
61
tissue
43
cell line
26
in vitro differentiated cells
Organ
862
epithelium
350
kidney
312
connective tissue
214
bodily fluid
204
blood
180
vasculature
170
skin of body
160
pancreas
149
embryo
130
lung
120
blood vessel
112
brain
91
liver
82
mammary gland
70
uterus
67
bone element
67
musculature of body
63
prostate gland
62
lymph node
57
intestine
56
penis
43
extraembryonic component
40
heart
40
large intestine
33
artery
33
eye
22
vein
19
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
trachea
4
adipose tissue
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
551
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
523
hg19
221
GRCh38
BIOSAMPLE
TYPE
862 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
candidate regulatory elements
chromatin state
variant allelic effects
binding sites
histone modifications
caQTL
eQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
1
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
foreskin keratinocyte
4
11
4
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
keratinocyte
2
5
3
3
1
1
2
pancreatic alpha cell
3
7
3
3
1
endothelial cell of hepatic sinusoid
4
6
6
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
3
5
4
3
1
mammary gland epithelial cell
1
4
3
3
1
1
bronchial epithelial cell
1
2
4
2
2
1
glomerular visceral epithelial cell
5
2
1
2
1
dermis blood vessel endothelial cell
2
6
2
kidney tubule cell
1
2
2
3
2
mammary epithelial cell
1
1
3
1
4
retinal pigment epithelial cell
3
1
2
1
2
1
epithelial cell of prostate
3
4
2
kidney glomerular epithelial cell
1
2
1
2
1
1
myoepithelial cell of mammary gland
2
4
2
renal cortical epithelial cell
1
2
1
2
1
1
choroid plexus epithelial cell
1
1
2
1
1
1
kidney epithelial cell
1
1
1
2
1
1
kidney loop of Henle thin ascending limb epithelial cell
7
luminal epithelial cell of mammary gland
2
3
1
1
pulmonary artery endothelial cell
1
1
2
1
1
1
type II pneumocyte
4
2
1
colon epithelial cell
3
3
cortical cell of adrenal gland
3
2
1
dermis lymphatic vessel endothelial cell
2
2
2
enterocyte
3
3
epithelial cell of esophagus
1
2
1
2
pancreatic polypeptide-secreting cell
2
2
1
1
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
2
Afferent / Efferent Arteriole Endothelial Cell
3
2
Connecting Tubule Cell
3
2
Cortical Thick Ascending Limb Cell
3
2
Cycling Endothelial Cell
3
2
Cycling Epithelial Cell
3
2
Degenerative Connecting Tubule Cell
3
2
Degenerative Connecting Tubule Cell / Principal Cell
3
2
Degenerative Cortical Thick Ascending Limb Cell
3
2
Degenerative Distal Convoluted Tubule Cell
3
2
Degenerative Intercalated Cell Type A
3
2
Degenerative Peritubular Capillary Endothelial Cell
3
2
Degenerative Principal Cell
3
2
Degenerative Proximal Tubule Epithelial Cell
3
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
2
Descending Thin Limb Cell Type 1
3
2
Distal Convoluted Tubule Cell Type 1
3
2
Glomerular Capillary Endothelial Cell
3
2
Intercalated Cell Type A
3
2
Intercalated Cell Type B
3
2
Lymphatic Endothelial Cell
3
2
Medullary Thick Ascending Limb Cell
3
2
Parietal Epithelial Cell
3
2
Peritubular Capillary Endothelial Cell
3
2
Podocyte
3
2
Principal Cell
3
2
Proximal Tubule Epithelial Cell Segment 1 and 2
3
2
Proximal Tubule Epithelial Cell Segment 3
3
2
Transitional Principal-Intercalated Cell
3
2
brain microvascular endothelial cell
1
1
2
1
iris pigment epithelial cell
1
1
2
1
kidney capillary endothelial cell
1
1
1
1
1
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
4
1
kidney loop of Henle thick ascending limb epithelial cell
5
lung microvascular endothelial cell
1
3
1
non-pigmented ciliary epithelial cell
1
1
2
1
pancreatic endothelial cell
1
1
3
tracheal epithelial cell
1
2
2
aortic endothelial cell
2
1
1
endothelial cell of lymphatic vessel
3
1
kidney connecting tubule epithelial cell
4
mesothelial cell
2
1
1
pancreatic alpha+beta cell
1
3
pancreatic cycling alpha cell
1
3
pancreatic gamma+epsilon cell
1
3
type I pneumocyte
3
1
S-shaped body
3
club cell
2
1
endocardial cell
2
1
epidermal melanocyte
1
1
1
epithelial cell of amnion
1
1
1
goblet cell
1
2
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
meso-epithelial cell
1
1
1
pancreatic A cell
3
parietal cell
1
1
1
peptic cell
1
1
1
thyroid follicular cell
1
1
1
type B pancreatic cell
3
basal cell of epidermis
1
1
capillary endothelial cell
2
cardiac endothelial cell
1
1
cholangiocyte
1
1
dermis microvascular lymphatic vessel endothelial cell
2
eccrine cell
1
1
endothelial cell of coronary artery
1
1
enterochromaffin-like cell
1
1
enterocyte of epithelium of small intestine
1
1
foveolar cell of stomach
1
1
granular cell of epidermis
1
1
kidney inner medulla collecting duct intercalated cell
2
myoepithelial cell
1
1
non keratinizing barrier epithelial cell
1
1
paneth cell
1
1
renal principal cell
1
1
renal vesicle
2
respiratory goblet cell
1
1
small intestine goblet cell
1
1
stomach neuroendocrine cell
1
1
type I cell of adrenal cortex
1
1
type II cell of adrenal cortex
1
1
ureteric bud
1
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Liver fetal (hepatocyte)
1
amniotic epithelial cell
1
bronchial goblet cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
enteroendocrine cell
1
epithelial cell of distal tubule
1
gastric goblet cell
1
granulosa cell
1
intestinal epithelial cell
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
lung neuroendocrine cell
1
neuroendocrine cell
1
parietal epithelial cell
1
placental villus capillary endothelial cell
1
proximal tubule
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal intercalated cell
1
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
glomerular visceral epithelial cell
1
1
vein endothelial cell
1
1
pancreatic acinar cell
1
pancreatic ductal cell
1
urothelial cell
1
See all biosamples
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