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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
216
accessible chromatin
137
target gene predictions
129
candidate regulatory elements
92
differential activity
68
chromatin state
50
binding sites
43
variant allelic effects
34
histone modifications
6
eQTL
3
Fine-mapped variants
2
caQTL
Date released
224
February, 2021
190
September, 2022
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
35
May, 2021
30
June, 2020
23
August, 2021
20
January, 2021
18
May, 2020
15
January, 2020
15
November, 2022
12
February, 2020
12
February, 2023
9
March, 2020
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
3
August, 2017
3
March, 2024
2
January, 2022
2
May, 2022
2
November, 2019
1
July, 2020
Available data
613
bed bed3+
331
tsv
178
bigWig
78
txt
65
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1036
Homo sapiens
Biosample type
816
primary cell
101
tissue
93
cell line
26
in vitro differentiated cells
Organ
946
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
274
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
725
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
682
hg19
257
GRCh38
files.file_type!
bed gappedPeak
BIOSAMPLE
TYPE
1036 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 146 more…
tissue
tibial nerve
2
3
3
6
4
2
2
3
pigmented layer of retina
20
prostate gland
1
2
4
2
2
2
1
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
+ See 18 more…
cell line
EndoC_BH1
8
8
1
3
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
1
2
1
1
1
RWPE1
1
1
2
1
1
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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