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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
237
gene expression
179
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
37
binding sites
28
histone modifications
15
variant allelic effects
2
caQTL
1
eQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
482
bed bed3+
309
tsv
136
bigWig
78
txt
50
bed bed9
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
866
Homo sapiens
Biosample type
752
primary cell
51
tissue
43
cell line
20
in vitro differentiated cells
Organ
866
epithelium
651
kidney
465
brain
439
connective tissue
360
musculature of body
307
lung
283
intestine
252
pancreas
250
heart
246
vasculature
244
limb
203
skin of body
190
bodily fluid
187
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
20
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
562
AMP
155
KPMP
127
ENCODE
20
T1D
2
community
Genome assembly (visualization)
532
hg19
202
GRCh38
month_released!
April, 2020
February, 2024
BIOSAMPLE
TYPE
866 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
caQTL
eQTL
primary cell
endothelial cell
8
14
7
2
1
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
hepatocyte
8
3
3
1
1
1
4
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 141 more…
tissue
pigmented layer of retina
19
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
breast - mammary tissue
1
+ See 7 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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