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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
241
gene expression
179
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
25
histone modifications
3
eQTL
2
caQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
June, 2020
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
512
bed bed3+
312
tsv
168
bigWig
66
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
901
Homo sapiens
Biosample type
781
primary cell
57
tissue
40
cell line
23
in vitro differentiated cells
Organ
901
epithelium
609
kidney
445
brain
427
connective tissue
368
musculature of body
305
lung
279
intestine
265
pancreas
259
vasculature
242
heart
238
limb
203
bodily fluid
199
blood vessel
197
embryo
196
skin of body
193
blood
167
large intestine
141
liver
140
extraembryonic component
116
stomach
103
eye
84
bone element
83
mammary gland
83
small intestine
82
adipose tissue
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
590
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
565
hg19
231
GRCh38
month_released!
August, 2021
June, 2020
BIOSAMPLE
TYPE
901 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
6
14
7
2
2
1
1
2
hepatocyte
13
7
3
1
1
1
2
1
epithelial cell of proximal tubule
15
1
1
2
1
1
1
endothelial cell of umbilical vein
1
4
6
5
2
1
foreskin keratinocyte
4
11
4
+ See 137 more…
tissue
pigmented layer of retina
20
breast epithelium
3
5
2
esophagus squamous epithelium
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
colon epithelial cell
1
1
1
choroid plexus epithelial cell
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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