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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
244
gene expression
214
accessible chromatin
139
target gene predictions
120
candidate regulatory elements
93
differential activity
68
chromatin state
48
binding sites
42
variant allelic effects
35
histone modifications
5
eQTL
3
Fine-mapped variants
3
caQTL
Date released
216
February, 2021
191
September, 2022
155
September, 2023
128
November, 2021
77
February, 2024
38
March, 2023
36
May, 2021
August, 2021
29
June, 2020
20
January, 2021
16
January, 2020
16
May, 2020
15
November, 2022
12
February, 2023
12
March, 2020
11
February, 2020
7
April, 2020
7
October, 2022
6
August, 2017
6
August, 2018
5
October, 2019
4
May, 2022
2
March, 2024
2
November, 2019
1
January, 2022
1
July, 2020
1
September, 2018
Available data
601
bed bed3+
320
tsv
173
bigWig
66
txt
62
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1014
Homo sapiens
Biosample type
805
primary cell
113
tissue
70
cell line
26
in vitro differentiated cells
Organ
926
epithelium
624
kidney
466
brain
447
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
265
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
702
AMP
155
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
671
hg19
257
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
1014 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
6
14
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
1
epithelial cell of proximal tubule
15
1
1
2
1
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
glomerular endothelial cell
13
2
1
2
1
1
+ See 138 more…
tissue
liver
1
4
10
13
1
9
1
2
1
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
right lobe of liver
1
1
2
1
1
3
+ See 17 more…
cell line
EndoC_BH1
8
8
1
3
1
HepG2
2
3
2
2
2
5
HuH-7
1
1
1
1
1
1
keratinocyte
3
1
HuH-7.5
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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