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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
201
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
91
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
1
caQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
November, 2019
Available data
535
bed bed3+
323
tsv
168
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
936
Homo sapiens
Biosample type
818
primary cell
51
tissue
41
cell line
26
in vitro differentiated cells
Organ
936
epithelium
652
kidney
465
brain
457
connective tissue
375
musculature of body
311
lung
289
intestine
274
pancreas
259
vasculature
249
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
197
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
625
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
589
hg19
232
GRCh38
month_released!
February, 2023
November, 2019
BIOSAMPLE
TYPE
936 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
1
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 146 more…
tissue
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
pigmented layer of retina
10
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
7
1
2
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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