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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
212
accessible chromatin
164
gene expression
118
target gene predictions
92
differential activity
53
chromatin state
48
candidate regulatory elements
40
variant allelic effects
11
binding sites
4
histone modifications
3
eQTL
2
caQTL
Date released
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
434
bed bed3+
239
tsv
173
bigWig
50
bed bed9
12
txt
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
747
Homo sapiens
Biosample type
650
primary cell
49
tissue
28
cell line
20
in vitro differentiated cells
Organ
747
epithelium
461
kidney
340
connective tissue
318
brain
274
musculature of body
240
lung
237
pancreas
216
intestine
205
vasculature
192
heart
177
limb
161
embryo
156
blood vessel
144
bodily fluid
137
blood
136
skin of body
127
large intestine
120
liver
113
extraembryonic component
92
eye
89
stomach
73
uterus
65
small intestine
59
mammary gland
58
adipose tissue
58
adrenal gland
55
placenta
54
artery
53
bone element
49
prostate gland
46
ureter
37
gonad
37
thymus
36
penis
35
lymph node
34
esophagus
31
spinal cord
23
spleen
19
lymphoid tissue
19
nerve
19
thyroid gland
18
ovary
18
testis
16
lymphatic vessel
15
mouth
15
vein
12
pituitary gland
11
bronchus
10
breast
9
skeleton
8
bone marrow
8
tongue
8
urinary bladder
8
vagina
4
nose
1
pericardium
1
trachea
Project
436
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
487
hg19
234
GRCh38
month_released!
March, 2020
February, 2021
BIOSAMPLE
TYPE
747 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
chromatin state
candidate regulatory elements
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
5
7
2
1
2
hepatocyte
8
6
3
1
1
2
3
pancreatic beta cell
8
3
2
3
1
endothelial cell of hepatic sinusoid
6
4
6
pancreatic acinar cell
6
3
3
3
1
+ See 129 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
2
2
esophagus squamous epithelium
1
2
2
2
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 11 more…
cell line
EndoC_BH1
8
8
3
1
colon epithelial cell
1
1
1
glomerular visceral epithelial cell
1
1
choroid plexus epithelial cell
1
epithelial cell of prostate
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
+ See 4 more…
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