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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
129
accessible chromatin
100
candidate regulatory elements
92
differential activity
73
target gene predictions
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
415
bed bed3+
324
tsv
93
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
817
Homo sapiens
Biosample type
687
primary cell
61
tissue
43
cell line
26
in vitro differentiated cells
Organ
817
epithelium
649
kidney
466
brain
406
connective tissue
363
musculature of body
302
lung
270
intestine
258
vasculature
253
pancreas
244
limb
243
heart
218
bodily fluid
213
embryo
207
blood
199
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
633
AMP
155
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
468
hg19
102
GRCh38
month_released!
October, 2019
November, 2021
BIOSAMPLE
TYPE
817 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
hepatocyte
13
7
1
2
1
1
2
4
endothelial cell
9
5
1
2
2
1
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 122 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
3
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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