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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
245
gene expression
212
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
41
variant allelic effects
38
binding sites
28
histone modifications
2
eQTL
1
caQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
541
bed bed3+
324
tsv
176
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
934
Homo sapiens
Biosample type
805
primary cell
60
tissue
43
cell line
26
in vitro differentiated cells
Organ
934
epithelium
641
kidney
442
brain
437
connective tissue
366
musculature of body
307
lung
288
intestine
275
pancreas
257
vasculature
244
heart
238
limb
214
embryo
200
skin of body
199
bodily fluid
197
blood vessel
188
blood
173
large intestine
153
liver
145
extraembryonic component
119
stomach
105
eye
88
bone element
84
adipose tissue
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
73
adrenal gland
72
placenta
70
artery
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
41
spinal cord
34
spleen
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
623
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
593
hg19
234
GRCh38
month_released!
October, 2022
February, 2020
BIOSAMPLE
TYPE
934 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
1
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
15
1
1
2
1
1
glomerular endothelial cell
13
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
1
+ See 146 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 14 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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