Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
98
target gene predictions
83
accessible chromatin
48
candidate regulatory elements
48
chromatin state
1
histone modifications
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
230
bed bed3+
81
bigWig
48
bed bed9
3
bam
3
bed gappedPeak
3
xls
1
bigBed narrowPeak
Organism
278
Homo sapiens
Biosample type
260
primary cell
12
tissue
3
cell line
3
in vitro differentiated cells
Organ
278
epithelium
228
kidney
219
lung
215
musculature of body
183
intestine
180
brain
170
connective tissue
138
limb
118
heart
112
skin of body
104
large intestine
102
extraembryonic component
83
embryo
81
vasculature
78
stomach
75
bodily fluid
69
blood
63
blood vessel
62
pancreas
61
small intestine
52
adrenal gland
51
liver
50
placenta
48
mammary gland
43
bone element
39
prostate gland
39
ureter
34
thymus
31
eye
30
penis
26
gonad
25
esophagus
24
adipose tissue
24
lymph node
24
spinal cord
21
artery
18
spleen
15
lymphoid tissue
14
ovary
14
thyroid gland
14
uterus
12
mouth
12
testis
9
lymphatic vessel
9
nerve
9
skeleton
8
bronchus
6
breast
6
tongue
6
urinary bladder
6
vagina
6
vein
4
bone marrow
3
nose
Project
151
AMP
127
ENCODE
Genome assembly (visualization)
278
hg19
176
GRCh38
BIOSAMPLE
TYPE
278 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
chromatin state
histone modifications
primary cell
endothelial cell
6
10
foreskin keratinocyte
4
4
4
mammary gland epithelial cell
4
1
3
3
keratinocyte
4
2
2
2
luminal epithelial cell of mammary gland
3
2
1
1
+ See 71 more…
tissue
breast epithelium
2
2
2
esophagus squamous epithelium
2
2
2
cell line
colon epithelial cell
1
1
1
in vitro differentiated cells
hepatocyte
1
1
1
See all biosamples
Download