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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
235
gene expression
208
accessible chromatin
170
target gene predictions
130
candidate regulatory elements
81
differential activity
77
binding sites
70
chromatin state
50
histone modifications
38
variant allelic effects
5
eQTL
2
caQTL
1
pQTL
Date released
253
February, 2021
202
September, 2022
135
September, 2023
124
November, 2021
90
February, 2024
37
May, 2021
35
June, 2020
34
March, 2023
26
August, 2021
24
October, 2022
20
January, 2021
15
November, 2022
12
February, 2023
11
May, 2020
10
January, 2020
8
February, 2020
6
August, 2018
5
April, 2020
5
March, 2020
5
October, 2019
4
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
678
bed bed3+
296
tsv
162
bigWig
78
txt
66
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1067
Homo sapiens
Biosample type
731
primary cell
246
cell line
64
tissue
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
781
AMP
135
KPMP
124
ENCODE
20
T1D
5
LungMap
2
community
Genome assembly (visualization)
749
hg19
257
GRCh38
organ_slims!
blood vessel
BIOSAMPLE
TYPE
1067 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
binding sites
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 133 more…
cell line
K562
1
23
7
2
7
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
1
2
1
2
1
1
+ See 36 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
blood
2
kidney epithelium
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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