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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
222
gene expression
160
accessible chromatin
96
candidate regulatory elements
96
target gene predictions
65
differential activity
51
chromatin state
39
binding sites
32
variant allelic effects
24
histone modifications
3
eQTL
2
caQTL
Date released
184
February, 2021
155
September, 2023
141
September, 2022
110
November, 2021
55
February, 2024
23
August, 2021
23
June, 2020
15
November, 2022
12
January, 2020
12
May, 2020
11
February, 2023
9
February, 2020
9
May, 2021
7
April, 2020
5
March, 2020
5
October, 2022
4
March, 2023
3
August, 2017
2
January, 2021
2
March, 2024
2
May, 2022
1
July, 2020
Available data
450
bed bed3+
274
tsv
129
bigWig
78
txt
48
bed bed9
3
csv
2
bigBed bed9
1
bigBed narrowPeak
Organism
790
Homo sapiens
Biosample type
696
primary cell
54
tissue
23
in vitro differentiated cells
17
cell line
Organ
949
epithelium
652
kidney
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
516
AMP
155
KPMP
110
ENCODE
7
LungMap
2
T1D
Genome assembly (visualization)
499
hg19
200
GRCh38
organ_slims!
pancreas
brain
BIOSAMPLE
TYPE
790 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 132 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
breast - mammary tissue
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
cell line
keratinocyte
3
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
glomerular visceral epithelial cell
1
1
+ See 2 more…
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