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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
284
gene expression
232
accessible chromatin
218
candidate regulatory elements
172
target gene predictions
109
chromatin state
94
differential activity
49
variant allelic effects
40
binding sites
28
histone modifications
5
eQTL
2
caQTL
Date released
316
September, 2022
274
February, 2021
160
September, 2023
120
November, 2021
75
February, 2024
38
March, 2023
35
August, 2021
33
May, 2021
31
June, 2020
27
May, 2020
20
January, 2020
20
January, 2021
15
November, 2022
12
February, 2023
10
February, 2020
9
March, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
March, 2024
2
August, 2017
2
May, 2022
1
April, 2019
1
January, 2022
1
July, 2020
1
May, 2019
1
November, 2019
Available data
737
bed bed3+
357
tsv
191
bigWig
107
bed bed9
90
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1233
Homo sapiens
Biosample type
780
primary cell
355
tissue
76
cell line
22
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
924
AMP
160
KPMP
120
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
847
hg19
301
GRCh38
organ_slims!
skin of body
BIOSAMPLE
TYPE
1233 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 146 more…
tissue
kidney
7
10
29
14
16
1
1
2
1
right kidney
1
20
10
10
1
renal cortex interstitium
1
20
9
9
1
renal pelvis
2
19
9
9
1
left kidney
18
9
9
+ See 29 more…
cell line
EndoC_BH1
8
8
1
3
1
HEK293
1
3
1
1
2
1
ACHN
1
2
1
1
Caki2
1
2
1
1
RCC 7860
1
2
1
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 3 more…
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