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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
273
gene expression
238
accessible chromatin
201
candidate regulatory elements
181
target gene predictions
117
chromatin state
92
differential activity
53
variant allelic effects
47
binding sites
34
histone modifications
9
Fine-mapped variants
9
eQTL
4
caQTL
Date released
298
September, 2022
261
February, 2021
155
September, 2023
130
November, 2021
80
February, 2024
38
March, 2023
38
May, 2021
31
August, 2021
31
June, 2020
29
January, 2020
29
May, 2020
21
March, 2020
20
January, 2021
19
February, 2020
15
February, 2023
15
November, 2022
7
April, 2020
7
October, 2019
6
April, 2019
6
August, 2018
6
October, 2022
4
November, 2019
3
August, 2017
3
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
762
bed bed3+
353
tsv
197
bigWig
109
bed bed9
78
txt
14
bigBed narrowPeak
12
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1258
Homo sapiens
Biosample type
840
primary cell
339
tissue
52
cell line
27
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
944
AMP
155
KPMP
130
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
884
hg19
336
GRCh38
organ_slims!
thyroid gland
BIOSAMPLE
TYPE
1258 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 152 more…
tissue
heart
3
5
37
20
21
2
1
1
renal pelvis
2
19
9
9
1
heart left ventricle
1
3
11
7
8
2
1
1
coronary artery
1
3
3
3
3
2
3
2
1
pigmented layer of retina
20
+ See 32 more…
cell line
EndoC_BH1
8
8
1
3
1
fibroblast of cardiac tissue
2
1
2
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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