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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
180
accessible chromatin
116
target gene predictions
92
differential activity
90
candidate regulatory elements
46
chromatin state
39
variant allelic effects
38
binding sites
25
histone modifications
3
eQTL
2
caQTL
Date released
184
February, 2021
155
September, 2023
139
September, 2022
126
November, 2021
75
February, 2024
38
March, 2023
33
May, 2021
23
August, 2021
22
June, 2020
20
January, 2021
12
May, 2020
11
January, 2020
9
February, 2020
7
April, 2020
6
August, 2018
5
March, 2020
5
October, 2019
4
October, 2022
2
August, 2017
2
February, 2023
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
489
bed bed3+
324
tsv
158
bigWig
78
txt
44
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
884
Homo sapiens
Biosample type
783
primary cell
41
cell line
40
tissue
20
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
574
AMP
155
KPMP
126
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
536
hg19
225
GRCh38
organ_slims!
vein
bodily fluid
eye
BIOSAMPLE
TYPE
884 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
candidate regulatory elements
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 142 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 5 more…
tissue
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 13 more…
in vitro differentiated cells
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 3 more…
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