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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
258
gene expression
230
accessible chromatin
188
candidate regulatory elements
167
target gene predictions
98
chromatin state
92
differential activity
48
variant allelic effects
42
binding sites
29
histone modifications
9
Fine-mapped variants
8
eQTL
2
caQTL
Date released
283
September, 2022
247
February, 2021
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
36
May, 2021
30
June, 2020
23
August, 2021
23
May, 2020
20
January, 2021
19
January, 2020
15
February, 2020
15
November, 2022
14
March, 2020
12
February, 2023
7
April, 2020
6
August, 2018
5
October, 2019
5
October, 2022
3
March, 2024
3
November, 2019
2
August, 2017
2
January, 2022
2
May, 2019
2
May, 2022
1
July, 2020
Available data
705
bed bed3+
341
tsv
189
bigWig
96
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1171
Homo sapiens
Biosample type
800
primary cell
297
tissue
48
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
860
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
816
hg19
307
GRCh38
organ_slims!
vein
BIOSAMPLE
TYPE
1171 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 146 more…
tissue
muscle of arm
1
33
16
16
1
muscle of leg
2
27
14
15
tibial nerve
2
3
6
3
4
2
3
2
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
3
2
+ See 38 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
2
1
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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