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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
212
accessible chromatin
177
target gene predictions
143
candidate regulatory elements
92
differential activity
88
binding sites
76
chromatin state
52
histone modifications
41
variant allelic effects
5
eQTL
2
caQTL
Date released
266
February, 2021
220
September, 2022
155
September, 2023
127
November, 2021
104
February, 2024
38
March, 2023
38
May, 2021
37
June, 2020
25
August, 2021
25
October, 2022
20
January, 2021
15
May, 2020
15
November, 2022
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
August, 2017
5
October, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
716
bed bed3+
325
tsv
164
bigWig
78
txt
71
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1142
Homo sapiens
Biosample type
815
primary cell
237
cell line
64
tissue
26
in vitro differentiated cells
Organ
935
epithelium
638
kidney
448
connective tissue
437
brain
370
musculature of body
311
lung
289
intestine
273
pancreas
250
vasculature
243
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
831
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
792
hg19
271
GRCh38
month_released!
January, 2020
BIOSAMPLE
TYPE
1142 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
binding sites
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
7
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
1
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 148 more…
cell line
K562
1
23
7
2
7
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
1
2
1
2
1
1
+ See 34 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
blood
2
kidney epithelium
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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