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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
219
accessible chromatin
217
target gene predictions
211
candidate regulatory elements
111
chromatin state
94
binding sites
92
differential activity
57
histone modifications
41
variant allelic effects
7
eQTL
2
caQTL
Date released
315
September, 2022
312
February, 2021
155
September, 2023
127
November, 2021
107
February, 2024
44
June, 2020
43
May, 2021
38
March, 2023
26
October, 2022
25
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
January, 2020
12
February, 2023
9
February, 2020
8
August, 2017
7
April, 2020
7
March, 2020
6
August, 2018
5
March, 2024
5
October, 2019
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
845
bed bed3+
327
tsv
164
bigWig
103
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1307
Homo sapiens
Biosample type
815
primary cell
268
cell line
198
tissue
26
in vitro differentiated cells
Organ
935
epithelium
638
kidney
450
connective tissue
437
brain
370
musculature of body
311
lung
289
intestine
273
pancreas
250
vasculature
243
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
996
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
953
hg19
307
GRCh38
month_released!
January, 2020
BIOSAMPLE
TYPE
1307 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
7
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
1
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 148 more…
cell line
K562
1
23
7
7
2
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
1
2
1
GM19240
1
2
1
1
2
1
+ See 41 more…
tissue
large intestine
1
14
27
13
1
sigmoid colon
1
7
10
5
pigmented layer of retina
20
transverse colon
1
5
8
4
1
breast epithelium
1
3
5
2
+ See 29 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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