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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
246
gene expression
191
target gene predictions
171
candidate regulatory elements
92
chromatin state
92
differential activity
88
binding sites
65
accessible chromatin
52
histone modifications
37
variant allelic effects
6
eQTL
2
caQTL
Date released
277
February, 2021
259
September, 2022
155
September, 2023
71
February, 2024
49
November, 2021
40
May, 2021
38
June, 2020
38
March, 2023
25
October, 2022
17
August, 2021
14
May, 2020
10
January, 2021
9
February, 2020
8
November, 2022
7
March, 2020
6
August, 2018
5
August, 2017
5
February, 2023
4
March, 2024
2
January, 2020
1
January, 2022
1
July, 2020
1
May, 2022
Available data
774
bed bed3+
326
tsv
bigWig
87
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1042
Homo sapiens
Biosample type
677
primary cell
236
cell line
105
tissue
24
in vitro differentiated cells
Organ
773
epithelium
616
kidney
445
brain
405
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
133
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
826
AMP
155
KPMP
49
ENCODE
10
T1D
2
community
Genome assembly (visualization)
699
hg19
181
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
1042 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
accessible chromatin
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
7
2
2
1
2
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
hepatocyte
8
3
1
1
1
1
4
2
glomerular endothelial cell
14
1
2
1
1
1
endothelial cell of umbilical vein
4
6
5
2
1
1
+ See 135 more…
cell line
K562
23
7
7
2
1
1
EndoC_BH1
8
1
3
7
1
GM12878
8
2
2
2
1
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
+ See 34 more…
tissue
adrenal gland
1
17
28
14
1
1
breast epithelium
3
5
2
1
esophagus squamous epithelium
2
6
2
1
pigmented layer of retina
7
blood
2
+ See 11 more…
in vitro differentiated cells
hepatocyte
1
2
1
retinal pigment epithelial cell
4
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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