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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
274
gene expression
265
accessible chromatin
258
candidate regulatory elements
258
target gene predictions
152
chromatin state
102
binding sites
99
histone modifications
92
differential activity
56
variant allelic effects
36
Fine-mapped variants
35
eQTL
2
caQTL
Date released
406
September, 2022
376
February, 2021
158
September, 2023
129
November, 2021
105
February, 2024
58
June, 2020
50
May, 2021
45
March, 2020
41
January, 2020
38
March, 2023
32
May, 2020
30
October, 2022
27
February, 2020
25
August, 2021
20
January, 2021
19
January, 2022
15
November, 2022
12
February, 2023
11
August, 2017
7
April, 2020
6
August, 2018
5
March, 2024
5
October, 2019
4
May, 2019
2
May, 2022
2
November, 2019
1
July, 2020
Available data
1040
bed bed3+
393
tsv
196
bigWig
141
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1628
Homo sapiens
Biosample type
852
primary cell
434
tissue
312
cell line
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1316
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1234
hg19
440
GRCh38
BIOSAMPLE
TYPE
1629 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
1
3
1
1
4
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 155 more…
tissue
brain
1
2
29
16
18
1
3
1
2
caudate nucleus
1
2
5
3
4
1
1
3
2
ovary
1
1
8
6
4
1
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
+ See 79 more…
cell line
K562
1
7
23
7
2
1
EndoC_BH1
8
8
1
3
1
GM12878
1
2
8
2
2
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
+ See 47 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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