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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
235
target gene predictions
227
accessible chromatin
178
gene expression
152
candidate regulatory elements
92
binding sites
92
differential activity
82
chromatin state
54
histone modifications
41
variant allelic effects
6
eQTL
2
caQTL
Date released
232
September, 2022
210
February, 2021
155
February, 2024
155
September, 2023
129
November, 2021
40
May, 2021
39
June, 2020
38
March, 2023
26
October, 2022
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
13
August, 2021
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
August, 2017
5
March, 2024
5
October, 2019
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
804
bed bed3+
327
tsv
177
bigWig
txt
77
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1161
Homo sapiens
Biosample type
755
primary cell
303
cell line
77
tissue
26
in vitro differentiated cells
Organ
871
epithelium
565
kidney
466
brain
453
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
264
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
848
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
886
hg19
343
GRCh38
files.file_type!
txt
BIOSAMPLE
TYPE
1161 results
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Clear Filters
target gene predictions
accessible chromatin
gene expression
candidate regulatory elements
binding sites
differential activity
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
7
15
6
2
1
2
1
2
hepatocyte
3
8
13
1
1
1
4
2
endothelial cell of umbilical vein
4
2
6
2
5
1
foreskin keratinocyte
4
11
4
pancreatic ductal cell
3
6
3
1
3
2
1
+ See 137 more…
cell line
HeLa-S3
55
5
1
3
K562
23
1
7
2
7
1
EndoC_BH1
1
8
8
3
1
GM12878
8
1
2
2
2
1
GM06990
1
1
2
2
1
1
+ See 36 more…
tissue
pigmented layer of retina
20
breast epithelium
3
1
5
2
esophagus squamous epithelium
2
1
6
2
uterus
2
1
1
3
1
1
blood
2
+ See 21 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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