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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
259
gene expression
252
target gene predictions
237
accessible chromatin
172
candidate regulatory elements
98
binding sites
97
chromatin state
93
differential activity
64
histone modifications
42
variant allelic effects
14
eQTL
3
Fine-mapped variants
3
caQTL
Date released
296
February, 2021
272
September, 2022
156
February, 2024
155
September, 2023
130
November, 2021
43
June, 2020
42
May, 2021
38
March, 2023
32
August, 2021
27
October, 2022
20
January, 2021
16
January, 2020
16
May, 2020
15
November, 2022
12
February, 2023
12
March, 2020
11
February, 2020
8
August, 2017
7
April, 2020
6
August, 2018
5
March, 2024
5
October, 2019
4
May, 2022
2
January, 2022
2
November, 2019
1
July, 2020
1
September, 2018
Available data
870
bed bed3+
335
tsv
182
bigWig
89
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1334
Homo sapiens
Biosample type
842
primary cell
331
cell line
135
tissue
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1020
AMP
155
KPMP
130
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
973
hg19
369
GRCh38
2
hg18
BIOSAMPLE
TYPE
1334 results
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Clear Filters
gene expression
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
chromatin state
differential activity
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
7
15
2
1
2
1
2
hepatocyte
13
3
8
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
1
2
2
1
1
endothelial cell of umbilical vein
4
2
6
2
5
1
+ See 151 more…
cell line
HeLa-S3
55
5
1
3
K562
23
1
7
2
7
1
EndoC_BH1
8
1
8
3
1
HepG2
3
2
2
3
2
5
GM12878
8
1
2
2
2
1
+ See 40 more…
tissue
liver
1
10
4
13
1
9
1
2
7
1
pigmented layer of retina
20
breast epithelium
3
1
5
2
esophagus squamous epithelium
2
1
6
2
right lobe of liver
1
1
2
1
1
3
+ See 23 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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