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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
257
gene expression
227
accessible chromatin
138
target gene predictions
125
candidate regulatory elements
92
differential activity
68
chromatin state
51
binding sites
41
variant allelic effects
histone modifications
3
eQTL
2
caQTL
Date released
202
February, 2021
192
September, 2022
155
September, 2023
128
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
30
June, 2020
22
January, 2021
20
August, 2021
16
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
7
October, 2022
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
3
May, 2022
2
March, 2024
1
July, 2020
1
November, 2019
Available data
583
bed bed3+
328
tsv
186
bigWig
78
txt
64
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
1
bed bed9+
Organism
1004
Homo sapiens
Biosample type
813
primary cell
87
cell line
80
tissue
24
in vitro differentiated cells
Organ
921
epithelium
646
kidney
433
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
690
AMP
155
KPMP
128
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
651
hg19
253
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
1004 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
hepatocyte
13
8
3
1
1
1
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 149 more…
cell line
EndoC_BH1
8
8
1
3
1
MG63
1
1
2
1
1
SJSA1
1
1
2
1
1
L1-S8
1
1
2
1
OCI-LY1
1
2
1
1
+ See 16 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
bone tissue
4
femur
1
2
1
+ See 25 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 4 more…
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