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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
257
gene expression
227
accessible chromatin
138
target gene predictions
125
candidate regulatory elements
92
differential activity
68
chromatin state
51
binding sites
variant allelic effects
histone modifications
3
eQTL
2
caQTL
Date released
201
February, 2021
192
September, 2022
155
September, 2023
128
November, 2021
50
February, 2024
38
March, 2023
34
May, 2021
30
June, 2020
22
January, 2021
20
August, 2021
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
7
October, 2022
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
3
May, 2022
2
March, 2024
2
May, 2020
1
July, 2020
1
November, 2019
Available data
545
bed bed3+
328
tsv
182
bigWig
78
txt
64
bed bed9
10
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
1
bed bed9+
Organism
963
Homo sapiens
Biosample type
774
primary cell
85
cell line
80
tissue
24
in vitro differentiated cells
Organ
880
epithelium
630
kidney
419
connective tissue
401
brain
361
musculature of body
306
lung
278
intestine
260
pancreas
243
vasculature
239
heart
234
limb
204
embryo
193
bodily fluid
190
skin of body
189
blood vessel
183
blood
169
large intestine
141
extraembryonic component
138
liver
116
stomach
103
eye
85
adipose tissue
84
small intestine
83
bone element
81
mammary gland
81
uterus
72
adrenal gland
70
placenta
70
prostate gland
66
artery
61
ureter
59
penis
58
lymph node
49
gonad
48
thymus
43
esophagus
43
spinal cord
34
spleen
25
testis
23
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
21
vein
20
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
649
AMP
155
KPMP
128
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
613
hg19
253
GRCh38
annotation_type!
histone modifications
variant allelic effects
BIOSAMPLE
TYPE
963 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
hepatocyte
13
8
3
1
1
1
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
endothelial cell of umbilical vein
2
4
6
5
2
+ See 143 more…
cell line
EndoC_BH1
8
8
1
3
MG63
1
1
2
1
1
SJSA1
1
1
2
1
1
L1-S8
1
1
2
1
OCI-LY1
1
2
1
1
+ See 16 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
bone tissue
4
femur
1
2
1
+ See 25 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 4 more…
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