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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
226
accessible chromatin
214
candidate regulatory elements
191
target gene predictions
113
chromatin state
92
differential activity
51
binding sites
41
variant allelic effects
36
histone modifications
6
eQTL
2
caQTL
Date released
315
September, 2022
270
February, 2021
155
September, 2023
132
November, 2021
79
February, 2024
40
May, 2021
38
March, 2023
35
June, 2020
23
August, 2021
22
January, 2021
16
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
8
March, 2020
7
April, 2020
7
August, 2017
7
October, 2022
6
August, 2018
5
March, 2024
5
October, 2019
3
January, 2022
3
May, 2022
1
July, 2020
1
November, 2019
Available data
764
bed bed3+
327
tsv
180
bigWig
105
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
1
bed bed9+
Organism
1228
Homo sapiens
Biosample type
836
primary cell
292
tissue
74
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
910
AMP
155
KPMP
132
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
873
hg19
299
GRCh38
BIOSAMPLE
TYPE
1228 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 152 more…
tissue
small intestine
1
29
17
15
1
large intestine
1
27
14
13
1
sigmoid colon
1
10
7
5
pigmented layer of retina
20
transverse colon
1
8
5
4
1
+ See 34 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
1
2
2
1
1
1
SW480
1
2
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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