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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
309
accessible chromatin
303
gene expression
302
candidate regulatory elements
272
target gene predictions
168
chromatin state
106
differential activity
83
binding sites
59
histone modifications
57
variant allelic effects
25
eQTL
6
Fine-mapped variants
4
caQTL
2
pQTL
Date released
469
September, 2022
374
February, 2021
178
November, 2021
172
September, 2023
94
February, 2024
53
May, 2021
51
June, 2020
45
March, 2023
34
August, 2021
26
May, 2020
24
January, 2020
24
January, 2021
22
November, 2022
20
October, 2022
18
February, 2020
16
March, 2020
13
February, 2023
11
April, 2020
10
August, 2017
7
August, 2018
7
January, 2022
7
October, 2019
6
May, 2022
3
March, 2024
3
November, 2020
2
May, 2024
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
1095
bed bed3+
390
tsv
234
bigWig
157
bed bed9
85
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
1
bed bed9+
Organism
1696
Homo sapiens
Biosample type
1112
primary cell
337
tissue
170
cell line
76
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1305
AMP
178
ENCODE
170
KPMP
24
T1D
11
LungMap
4
ITG
4
community
Genome assembly (visualization)
1272
hg19
424
GRCh38
2
hg18
BIOSAMPLE
TYPE
1696 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
15
9
7
2
1
2
1
2
hepatocyte
8
13
1
3
1
1
4
2
fibroblast
16
4
1
6
2
epithelial cell of proximal tubule
1
16
2
1
1
1
1
pericyte cell
10
1
10
1
+ See 200 more…
tissue
lung
1
33
17
16
1
left lung
26
13
13
right lung
1
22
11
11
adipose tissue
2
3
7
8
6
1
1
4
subcutaneous adipose tissue
2
5
2
1
1
1
6
3
+ See 30 more…
cell line
A549
1
21
19
18
2
1
EndoC_BH1
8
8
1
3
1
IMR-90
1
2
2
1
2
1
PC-9
1
2
2
1
1
1
GM23248
1
2
1
1
1
1
+ See 26 more…
in vitro differentiated cells
adipocyte
4
1
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
2
1
1
+ See 17 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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