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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
251
accessible chromatin
candidate regulatory elements
196
target gene predictions
123
chromatin state
92
differential activity
75
histone modifications
57
binding sites
56
variant allelic effects
36
Fine-mapped variants
32
eQTL
2
caQTL
Date released
219
September, 2022
201
February, 2021
158
September, 2023
127
November, 2021
77
February, 2024
45
June, 2020
45
May, 2021
44
March, 2020
41
January, 2020
38
March, 2023
32
May, 2020
27
February, 2020
23
August, 2021
20
January, 2021
18
January, 2022
15
November, 2022
12
February, 2023
11
October, 2022
9
August, 2017
7
April, 2020
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
Available data
635
bed bed3+
391
tsv
195
bigWig
114
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1191
Homo sapiens
Biosample type
750
primary cell
318
tissue
95
cell line
28
in vitro differentiated cells
1
stem cell
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
881
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
800
hg19
382
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
1192 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
2
1
2
hepatocyte
13
8
3
1
4
1
2
epithelial cell of proximal tubule
16
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
pancreatic ductal cell
3
6
3
3
2
1
1
+ See 150 more…
tissue
brain
1
2
16
18
3
1
1
2
pigmented layer of retina
20
caudate nucleus
1
2
3
4
1
1
3
2
frontal cortex
2
2
2
2
1
3
2
cerebellum
2
1
2
2
1
3
2
+ See 75 more…
cell line
EndoC_BH1
8
8
1
3
1
pituitary stalk
10
BE(2)-C
1
1
1
1
2
SK-N-DZ
1
2
2
1
SK-N-MC
1
1
1
1
2
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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