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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
251
accessible chromatin
207
candidate regulatory elements
196
target gene predictions
123
chromatin state
differential activity
75
histone modifications
57
binding sites
56
variant allelic effects
36
Fine-mapped variants
32
eQTL
2
caQTL
Date released
325
September, 2022
302
February, 2021
127
November, 2021
96
September, 2023
77
February, 2024
45
June, 2020
45
May, 2021
44
March, 2020
41
January, 2020
32
May, 2020
27
February, 2020
23
August, 2021
20
January, 2021
18
January, 2022
15
November, 2022
11
February, 2023
11
October, 2022
9
August, 2017
9
March, 2023
7
April, 2020
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
Available data
842
bed bed3+
301
tsv
195
bigWig
114
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1306
Homo sapiens
Biosample type
752
primary cell
410
tissue
114
cell line
30
in vitro differentiated cells
1
stem cell
Organ
857
epithelium
596
kidney
466
brain
444
connective tissue
374
musculature of body
311
lung
289
intestine
255
heart
248
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1060
AMP
127
ENCODE
93
KPMP
20
T1D
7
LungMap
Genome assembly (visualization)
1007
hg19
382
GRCh38
annotation_type!
differential activity
BIOSAMPLE
TYPE
1307 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
2
1
2
hepatocyte
13
8
1
3
1
4
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 152 more…
tissue
brain
1
2
29
16
18
3
1
1
2
caudate nucleus
1
2
5
3
4
1
1
3
2
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
cerebellum
2
1
3
2
2
1
3
2
+ See 76 more…
cell line
EndoC_BH1
8
8
1
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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