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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
264
gene expression
231
accessible chromatin
185
candidate regulatory elements
172
target gene predictions
111
chromatin state
89
differential activity
65
histone modifications
54
variant allelic effects
41
binding sites
36
Fine-mapped variants
32
eQTL
2
caQTL
Date released
289
September, 2022
270
February, 2021
158
September, 2023
127
November, 2021
77
February, 2024
43
March, 2020
40
January, 2020
36
March, 2023
34
June, 2020
30
May, 2020
27
February, 2020
23
August, 2021
20
January, 2021
19
May, 2021
18
January, 2022
15
November, 2022
11
February, 2023
9
August, 2017
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
748
bed bed3+
382
tsv
193
bigWig
102
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1281
Homo sapiens
Biosample type
841
primary cell
410
tissue
cell line
30
in vitro differentiated cells
1
stem cell
Organ
906
epithelium
611
kidney
427
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
973
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
901
hg19
368
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
1282 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
2
1
2
hepatocyte
13
8
1
3
1
4
2
1
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 152 more…
tissue
brain
1
2
29
16
18
3
1
1
2
caudate nucleus
1
2
5
3
4
1
1
3
2
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
cerebellum
2
1
3
2
2
1
3
2
+ See 76 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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