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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
276
gene expression
259
accessible chromatin
215
candidate regulatory elements
203
target gene predictions
130
chromatin state
92
differential activity
78
histone modifications
60
binding sites
60
variant allelic effects
42
Fine-mapped variants
37
eQTL
4
caQTL
Date released
340
September, 2022
312
February, 2021
158
September, 2023
127
November, 2021
77
February, 2024
50
March, 2020
47
June, 2020
47
May, 2021
45
January, 2020
38
March, 2023
37
May, 2020
30
February, 2020
23
August, 2021
21
January, 2022
20
January, 2021
15
February, 2023
15
November, 2022
12
October, 2022
9
August, 2017
7
April, 2020
6
August, 2018
5
May, 2019
5
October, 2019
4
November, 2019
3
March, 2024
2
May, 2022
1
July, 2020
Available data
877
bed bed3+
402
tsv
202
bigWig
121
bed bed9
78
txt
14
bigBed narrowPeak
10
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1455
Homo sapiens
Biosample type
852
primary cell
452
tissue
121
cell line
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1145
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1055
hg19
408
GRCh38
organ_slims!
gonad
BIOSAMPLE
TYPE
1456 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
2
1
2
hepatocyte
13
8
1
3
1
4
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 154 more…
tissue
brain
1
2
29
16
18
3
1
1
2
caudate nucleus
1
2
5
3
4
1
1
3
2
coronary artery
1
3
3
3
3
2
3
2
1
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
3
2
+ See 80 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 20 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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