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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
280
accessible chromatin
273
gene expression
221
candidate regulatory elements
203
target gene predictions
130
chromatin state
92
differential activity
77
histone modifications
61
binding sites
57
variant allelic effects
36
Fine-mapped variants
33
eQTL
2
caQTL
Date released
346
September, 2022
314
February, 2021
158
September, 2023
130
November, 2021
77
February, 2024
49
June, 2020
45
May, 2021
44
March, 2020
42
January, 2020
38
March, 2023
33
May, 2020
29
February, 2020
26
February, 2023
23
August, 2021
22
November, 2022
20
January, 2021
18
January, 2022
12
October, 2022
9
August, 2017
7
April, 2020
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
Available data
899
bed bed3+
393
tsv
214
bigWig
121
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1464
Homo sapiens
Biosample type
848
primary cell
459
tissue
127
cell line
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1151
AMP
155
KPMP
130
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1071
hg19
394
GRCh38
BIOSAMPLE
TYPE
1465 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
15
9
7
1
2
2
1
2
hepatocyte
8
13
1
3
1
4
1
2
epithelial cell of proximal tubule
1
16
2
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 155 more…
tissue
brain
2
1
29
16
18
3
1
1
2
retina
23
1
6
3
3
1
1
1
1
caudate nucleus
2
1
5
3
4
1
1
3
2
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
+ See 78 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 22 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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