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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
274
gene expression
258
candidate regulatory elements
222
target gene predictions
206
accessible chromatin
147
chromatin state
92
differential activity
76
histone modifications
57
binding sites
56
variant allelic effects
36
Fine-mapped variants
33
eQTL
2
caQTL
Date released
394
September, 2022
331
February, 2021
158
September, 2023
127
November, 2021
77
February, 2024
June, 2020
47
May, 2021
45
March, 2020
41
January, 2020
38
March, 2023
32
May, 2020
27
February, 2020
23
August, 2021
20
January, 2021
19
January, 2022
15
November, 2022
12
February, 2023
11
October, 2022
10
August, 2017
7
April, 2020
6
August, 2018
5
March, 2024
5
October, 2019
4
May, 2019
2
May, 2022
2
November, 2019
1
July, 2020
Available data
877
bed bed3+
393
tsv
195
bigWig
137
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1458
Homo sapiens
Biosample type
825
primary cell
500
tissue
106
cell line
27
in vitro differentiated cells
1
stem cell
Organ
924
epithelium
637
kidney
445
brain
440
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
1148
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1065
hg19
406
GRCh38
month_released!
June, 2020
BIOSAMPLE
TYPE
1459 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
7
15
1
2
2
1
2
hepatocyte
13
1
3
7
1
4
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
1
endothelial cell of umbilical vein
6
4
1
5
2
1
+ See 151 more…
tissue
stomach
1
40
21
19
1
1
brain
1
29
16
1
18
3
1
1
2
caudate nucleus
1
5
3
1
4
1
1
3
2
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
+ See 80 more…
cell line
EndoC_BH1
8
1
8
3
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-DZ
4
2
2
1
SK-N-MC
2
1
1
1
2
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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