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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
251
gene expression
192
accessible chromatin
174
target gene predictions
136
candidate regulatory elements
92
differential activity
87
binding sites
76
chromatin state
50
histone modifications
41
variant allelic effects
2
caQTL
1
eQTL
Date released
258
February, 2021
214
September, 2022
155
September, 2023
127
November, 2021
94
February, 2024
38
March, 2023
37
May, 2021
33
June, 2020
25
October, 2022
23
August, 2021
20
January, 2021
15
May, 2020
14
January, 2020
8
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
November, 2022
5
August, 2017
5
October, 2019
2
February, 2023
2
May, 2022
1
July, 2020
1
November, 2019
Available data
682
bed bed3+
322
tsv
155
bigWig
78
txt
71
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1102
Homo sapiens
Biosample type
828
primary cell
248
cell line
tissue
26
in vitro differentiated cells
Organ
888
epithelium
365
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
0
breast
Project
791
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
755
hg19
275
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
1102 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
binding sites
chromatin state
histone modifications
variant allelic effects
caQTL
eQTL
primary cell
endothelial cell
9
15
7
2
1
2
2
1
hepatocyte
13
8
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
2
5
1
+ See 148 more…
cell line
K562
1
23
7
2
7
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
1
2
1
2
1
1
+ See 37 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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