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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
300
accessible chromatin
200
target gene predictions
180
candidate regulatory elements
106
differential activity
101
chromatin state
74
binding sites
57
variant allelic effects
53
histone modifications
22
eQTL
6
Fine-mapped variants
4
caQTL
2
pQTL
Date released
271
September, 2022
198
February, 2021
177
November, 2021
76
February, 2024
70
September, 2023
45
June, 2020
35
March, 2023
30
May, 2021
25
May, 2020
23
January, 2020
22
January, 2021
22
November, 2022
21
August, 2021
18
October, 2022
13
February, 2023
11
March, 2020
10
April, 2020
10
August, 2017
7
October, 2019
6
January, 2022
5
May, 2022
3
February, 2020
2
November, 2020
2
September, 2018
1
June, 2021
1
November, 2019
Available data
877
bed bed3+
222
bigWig
112
tsv
91
bed bed9
15
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1105
Homo sapiens
Biosample type
834
primary cell
138
tissue
66
cell line
66
in vitro differentiated cells
1
stem cell
Organ
696
epithelium
450
kidney
447
brain
409
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
822
AMP
177
ENCODE
68
KPMP
22
T1D
10
LungMap
4
ITG
2
community
Genome assembly (visualization)
984
hg19
347
GRCh38
2
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
1105 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
15
7
2
2
1
1
2
fibroblast
16
4
1
6
2
pericyte cell
10
10
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
hepatocyte
8
3
1
1
1
2
4
+ See 169 more…
tissue
adipose tissue
2
8
7
6
1
1
4
pigmented layer of retina
20
omental fat pad
2
2
5
2
2
3
subcutaneous adipose tissue
2
2
1
1
1
6
3
breast epithelium
1
3
5
2
+ See 23 more…
cell line
EndoC_BH1
8
1
3
1
GM23248
1
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
keratinocyte
3
1
+ See 18 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
1
2
1
+ See 12 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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