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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
315
gene expression
312
accessible chromatin
219
target gene predictions
204
candidate regulatory elements
118
chromatin state
106
differential activity
77
binding sites
61
variant allelic effects
56
histone modifications
37
eQTL
11
Fine-mapped variants
4
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
328
February, 2021
311
September, 2022
178
November, 2021
172
September, 2023
96
February, 2024
56
May, 2021
51
March, 2023
48
June, 2020
42
August, 2021
30
May, 2020
28
January, 2020
23
March, 2020
22
January, 2021
22
November, 2022
20
February, 2020
18
October, 2022
13
August, 2017
13
February, 2023
10
April, 2020
10
January, 2022
8
October, 2019
7
August, 2018
5
May, 2022
3
November, 2020
2
January, 2018
2
March, 2024
2
November, 2019
2
September, 2018
1
April, 2019
1
July, 2020
1
June, 2021
Available data
948
bed bed3+
404
tsv
239
bigWig
104
bed bed9
85
txt
15
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1526
Homo sapiens
Biosample type
1103
primary cell
261
tissue
85
cell line
76
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1140
AMP
178
ENCODE
170
KPMP
22
T1D
10
LungMap
4
ITG
2
community
Genome assembly (visualization)
1083
hg19
385
GRCh38
2
hg18
BIOSAMPLE
TYPE
1526 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
fibroblast
16
4
1
6
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
pericyte cell
10
10
1
1
+ See 196 more…
tissue
islet of Langerhans
11
6
1
3
2
1
1
13
2
2
2
adipose tissue
3
2
8
7
6
1
1
4
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
+ See 30 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
1
2
1
1
1
Panc1
2
2
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
+ See 21 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
1
2
1
+ See 17 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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