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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
264
candidate regulatory elements
259
accessible chromatin
231
target gene predictions
155
chromatin state
92
differential activity
80
histone modifications
60
binding sites
56
variant allelic effects
36
Fine-mapped variants
33
eQTL
caQTL
Date released
421
September, 2022
334
February, 2021
158
September, 2023
129
November, 2021
77
February, 2024
51
June, 2020
48
May, 2021
44
March, 2020
41
January, 2020
38
March, 2023
32
May, 2020
27
February, 2020
23
August, 2021
20
January, 2021
19
January, 2022
15
November, 2022
11
February, 2023
11
October, 2022
9
August, 2017
7
April, 2020
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
Available data
948
bed bed3+
391
tsv
197
bigWig
146
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1537
Homo sapiens
Biosample type
874
primary cell
508
tissue
120
cell line
35
in vitro differentiated cells
1
stem cell
Organ
947
epithelium
652
kidney
466
brain
458
connective tissue
373
musculature of body
311
lung
289
intestine
277
pancreas
263
vasculature
253
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1225
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1146
hg19
416
GRCh38
annotation_type!
caQTL
BIOSAMPLE
TYPE
1538 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
primary cell
endothelial cell
9
15
7
1
2
2
1
hepatocyte
13
1
8
3
1
4
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 159 more…
tissue
brain
1
29
2
16
18
3
1
1
2
placenta
26
1
15
14
2
1
1
caudate nucleus
1
5
2
3
4
1
1
3
2
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
+ See 82 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
4
1
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 20 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
+ See 8 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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