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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
273
gene expression
243
accessible chromatin
227
candidate regulatory elements
204
target gene predictions
136
chromatin state
92
differential activity
51
variant allelic effects
50
binding sites
39
histone modifications
eQTL
9
Fine-mapped variants
4
caQTL
Date released
355
September, 2022
275
February, 2021
155
September, 2023
134
November, 2021
79
February, 2024
41
May, 2021
38
March, 2023
36
June, 2020
31
August, 2021
26
January, 2020
26
May, 2020
21
March, 2020
20
January, 2021
15
February, 2020
15
February, 2023
15
November, 2022
7
April, 2020
7
October, 2019
7
October, 2022
6
April, 2019
6
August, 2018
4
November, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
820
bed bed3+
350
tsv
197
bigWig
128
bed bed9
78
txt
14
bigBed narrowPeak
12
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1328
Homo sapiens
Biosample type
877
primary cell
364
tissue
55
cell line
32
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
1010
AMP
155
KPMP
134
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
957
hg19
350
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
1328 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
hepatocyte
13
8
1
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 160 more…
tissue
heart
3
5
37
20
21
2
1
1
placenta
1
26
15
14
1
2
heart left ventricle
1
3
11
7
8
2
1
pigmented layer of retina
20
coronary artery
1
3
3
3
3
2
3
1
+ See 33 more…
cell line
EndoC_BH1
8
8
1
3
1
fibroblast of cardiac tissue
2
1
2
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
HTR-8/Svneo
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
+ See 6 more…
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