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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
273
gene expression
243
accessible chromatin
227
candidate regulatory elements
204
target gene predictions
136
chromatin state
92
differential activity
51
variant allelic effects
50
binding sites
histone modifications
10
eQTL
9
Fine-mapped variants
4
caQTL
Date released
354
September, 2022
240
February, 2021
155
September, 2023
134
November, 2021
81
February, 2024
41
May, 2021
38
March, 2023
36
June, 2020
28
August, 2021
26
January, 2020
26
May, 2020
21
March, 2020
20
January, 2021
19
February, 2020
15
February, 2023
15
November, 2022
7
April, 2020
7
October, 2019
7
October, 2022
6
April, 2019
6
August, 2018
4
January, 2022
4
November, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
783
bed bed3+
353
tsv
197
bigWig
128
bed bed9
78
txt
14
bigBed narrowPeak
12
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1299
Homo sapiens
Biosample type
858
primary cell
365
tissue
46
cell line
30
in vitro differentiated cells
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
981
AMP
155
KPMP
134
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
924
hg19
353
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
1299 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
hepatocyte
13
8
1
3
1
2
1
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 159 more…
tissue
heart
3
5
37
20
21
2
1
placenta
1
26
15
14
1
1
heart left ventricle
1
3
11
7
8
2
1
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
+ See 33 more…
cell line
EndoC_BH1
8
8
1
3
1
HTR-8/Svneo
1
1
1
colon epithelial cell
1
1
1
fibroblast of cardiac tissue
2
1
keratinocyte
3
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
+ See 6 more…
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