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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
225
accessible chromatin
171
candidate regulatory elements
164
target gene predictions
92
chromatin state
91
differential activity
50
binding sites
42
variant allelic effects
35
histone modifications
5
eQTL
1
caQTL
Date released
268
September, 2022
240
February, 2021
155
September, 2023
132
November, 2021
76
February, 2024
38
March, 2023
37
May, 2021
35
June, 2020
February, 2023
23
August, 2021
22
November, 2022
20
January, 2021
16
May, 2020
15
January, 2020
11
February, 2020
8
October, 2022
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
687
bed bed3+
325
tsv
179
bigWig
89
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1130
Homo sapiens
Biosample type
860
primary cell
184
tissue
55
cell line
31
in vitro differentiated cells
Organ
937
epithelium
652
kidney
466
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
262
vasculature
252
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
814
AMP
155
KPMP
132
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
780
hg19
280
GRCh38
month_released!
February, 2023
BIOSAMPLE
TYPE
1130 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
1
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 156 more…
tissue
placenta
1
26
15
14
1
2
1
retina
1
9
6
3
3
1
1
1
1
chorionic villus
8
4
4
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
+ See 23 more…
cell line
EndoC_BH1
8
8
1
2
1
WERI-Rb-1
1
2
1
1
2
1
keratinocyte
3
1
HTR-8/Svneo
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
+ See 5 more…
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