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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
257
gene expression
209
accessible chromatin
170
candidate regulatory elements
169
target gene predictions
99
chromatin state
92
differential activity
41
binding sites
34
histone modifications
25
variant allelic effects
9
Fine-mapped variants
7
eQTL
4
caQTL
Date released
259
September, 2022
243
February, 2021
155
September, 2023
132
November, 2021
February, 2024
38
March, 2023
38
May, 2021
31
August, 2021
30
June, 2020
26
January, 2020
26
May, 2020
21
March, 2020
20
January, 2021
19
February, 2020
15
February, 2023
15
November, 2022
7
April, 2020
7
October, 2019
6
April, 2019
6
August, 2018
6
October, 2022
4
November, 2019
3
August, 2017
3
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
651
bed bed3+
338
tsv
162
bigWig
96
bed bed9
78
txt
12
bigBed bed9
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1116
Homo sapiens
Biosample type
783
primary cell
260
tissue
52
cell line
21
in vitro differentiated cells
Organ
873
epithelium
651
kidney
465
brain
440
connective tissue
360
musculature of body
310
lung
283
intestine
252
pancreas
250
heart
249
vasculature
244
limb
203
skin of body
190
bodily fluid
189
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
800
AMP
155
KPMP
132
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
757
hg19
285
GRCh38
month_released!
February, 2024
BIOSAMPLE
TYPE
1116 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
8
14
7
2
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
hepatocyte
8
3
1
3
1
1
4
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 150 more…
tissue
heart
3
5
37
20
21
1
1
2
heart left ventricle
1
3
11
7
8
1
2
1
coronary artery
1
3
3
3
3
2
3
2
1
heart right ventricle
1
1
6
5
5
1
pigmented layer of retina
19
+ See 21 more…
cell line
EndoC_BH1
8
8
1
3
1
fibroblast of cardiac tissue
2
1
2
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 3 more…
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