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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
243
candidate regulatory elements
238
accessible chromatin
188
target gene predictions
121
chromatin state
50
variant allelic effects
47
binding sites
33
histone modifications
19
gene expression
5
eQTL
2
caQTL
2
differential activity
Date released
349
September, 2022
196
February, 2021
128
November, 2021
61
February, 2024
33
June, 2020
27
May, 2020
20
August, 2021
20
January, 2020
20
January, 2021
17
May, 2021
15
November, 2022
11
February, 2023
9
February, 2020
7
April, 2020
7
October, 2022
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
2
March, 2023
2
May, 2022
1
April, 2019
1
January, 2022
1
May, 2019
1
November, 2019
Available data
798
bed bed3+
tsv
195
bigWig
118
bed bed9
90
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
948
Homo sapiens
Biosample type
516
primary cell
343
tissue
70
cell line
19
in vitro differentiated cells
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
791
AMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
919
hg19
311
GRCh38
files.file_type!
tsv
BIOSAMPLE
TYPE
948 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
variant allelic effects
binding sites
histone modifications
gene expression
eQTL
caQTL
differential activity
primary cell
endothelial cell
15
7
2
2
1
1
1
2
hepatocyte
1
8
3
1
2
1
4
4
endothelial cell of umbilical vein
6
2
4
5
1
2
foreskin keratinocyte
11
4
4
keratinocyte
3
2
5
3
1
1
2
+ See 96 more…
tissue
kidney
29
10
14
16
1
1
2
1
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
left kidney
18
9
9
+ See 24 more…
cell line
EndoC_BH1
8
1
1
2
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 1 more…
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