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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
238
gene expression
212
accessible chromatin
168
candidate regulatory elements
147
target gene predictions
92
differential activity
88
chromatin state
49
binding sites
41
variant allelic effects
33
histone modifications
5
eQTL
2
caQTL
Date released
246
September, 2022
242
February, 2021
155
September, 2023
127
November, 2021
79
February, 2024
May, 2021
38
March, 2023
32
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
7
March, 2020
7
October, 2022
6
August, 2017
6
August, 2018
5
October, 2019
4
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
654
bed bed3+
309
tsv
176
bigWig
82
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1075
Homo sapiens
Biosample type
803
primary cell
191
tissue
57
cell line
24
in vitro differentiated cells
Organ
915
epithelium
652
kidney
455
brain
442
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
764
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
739
hg19
270
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
1075 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
8
15
7
2
2
1
1
2
hepatocyte
13
8
1
2
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
3
5
2
1
+ See 146 more…
tissue
large intestine
1
27
13
13
1
sigmoid colon
1
10
6
5
pigmented layer of retina
20
transverse colon
1
8
4
4
1
esophagus squamous epithelium
1
6
2
2
+ See 27 more…
cell line
HT-29
1
2
1
1
1
1
SW480
1
2
1
1
1
1
EndoC_BH1
1
1
3
1
HCT116
2
3
1
RKO
1
1
1
1
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 2 more…
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