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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
219
accessible chromatin
168
candidate regulatory elements
162
target gene predictions
92
differential activity
88
chromatin state
43
binding sites
41
variant allelic effects
33
histone modifications
5
eQTL
1
caQTL
Date released
246
September, 2022
242
February, 2021
155
September, 2023
127
November, 2021
79
February, 2024
39
May, 2021
38
March, 2023
32
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
7
March, 2020
October, 2022
6
August, 2017
6
August, 2018
5
October, 2019
4
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
669
bed bed3+
326
tsv
176
bigWig
82
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1107
Homo sapiens
Biosample type
813
primary cell
195
tissue
73
cell line
26
in vitro differentiated cells
Organ
943
epithelium
650
kidney
460
brain
446
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
796
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
754
hg19
270
GRCh38
month_released!
October, 2022
BIOSAMPLE
TYPE
1107 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
1
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
1
+ See 146 more…
tissue
large intestine
1
27
14
13
1
sigmoid colon
1
10
7
5
pigmented layer of retina
20
transverse colon
1
8
5
4
1
breast epithelium
1
5
3
2
+ See 27 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
1
2
2
1
1
1
SW480
1
2
1
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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