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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
238
gene expression
228
candidate regulatory elements
196
target gene predictions
193
accessible chromatin
123
chromatin state
92
differential activity
46
binding sites
32
histone modifications
15
variant allelic effects
2
caQTL
2
eQTL
Date released
358
September, 2022
264
February, 2021
155
September, 2023
127
November, 2021
February, 2024
38
March, 2023
38
May, 2021
31
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
October, 2022
9
February, 2020
8
April, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
August, 2017
3
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
712
bed bed3+
310
tsv
144
bigWig
119
bed bed9
78
txt
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1167
Homo sapiens
Biosample type
776
primary cell
232
tissue
139
cell line
20
in vitro differentiated cells
Organ
873
epithelium
651
kidney
465
brain
440
connective tissue
360
musculature of body
310
lung
283
intestine
252
pancreas
250
heart
249
vasculature
244
limb
203
skin of body
190
bodily fluid
189
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
855
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
831
hg19
272
GRCh38
month_released!
February, 2024
BIOSAMPLE
TYPE
1167 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
caQTL
eQTL
primary cell
endothelial cell
8
7
14
2
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
hepatocyte
8
1
3
3
1
1
4
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 145 more…
tissue
lung
1
33
17
16
1
left lung
26
13
13
right lung
22
11
1
11
pigmented layer of retina
19
upper lobe of left lung
7
3
1
3
1
1
+ See 11 more…
cell line
A549
21
19
1
18
2
1
EndoC_BH1
8
1
8
3
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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