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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
228
candidate regulatory elements
207
accessible chromatin
196
target gene predictions
121
chromatin state
92
differential activity
52
binding sites
41
variant allelic effects
32
histone modifications
4
eQTL
2
caQTL
Date released
358
September, 2022
264
February, 2021
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
38
May, 2021
31
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
January, 2020
12
February, 2023
10
October, 2022
9
February, 2020
8
April, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
August, 2017
3
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
758
bed bed3+
325
tsv
165
bigWig
117
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1229
Homo sapiens
Biosample type
823
primary cell
242
tissue
138
cell line
26
in vitro differentiated cells
Organ
935
epithelium
638
kidney
448
connective tissue
437
brain
370
musculature of body
311
lung
289
intestine
273
pancreas
250
vasculature
243
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
917
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
878
hg19
290
GRCh38
month_released!
January, 2020
BIOSAMPLE
TYPE
1229 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
7
3
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
1
foreskin keratinocyte
11
4
4
+ See 148 more…
tissue
lung
1
33
17
16
1
left lung
26
13
13
right lung
22
1
11
11
pigmented layer of retina
20
upper lobe of left lung
7
1
3
3
1
1
+ See 19 more…
cell line
A549
21
1
19
18
2
1
EndoC_BH1
8
8
1
3
1
IMR-90
2
1
2
1
2
1
PC-9
2
1
2
1
1
1
WI38
5
1
1
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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