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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
227
candidate regulatory elements
210
accessible chromatin
189
target gene predictions
122
chromatin state
92
differential activity
52
binding sites
38
variant allelic effects
30
histone modifications
4
eQTL
2
caQTL
Date released
355
September, 2022
262
February, 2021
155
September, 2023
112
November, 2021
73
February, 2024
38
March, 2023
38
May, 2021
31
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
October, 2022
9
February, 2020
8
April, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
August, 2017
3
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
748
bed bed3+
325
tsv
168
bigWig
118
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1220
Homo sapiens
Biosample type
817
primary cell
241
tissue
136
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
923
AMP
155
KPMP
112
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
869
hg19
288
GRCh38
organ_slims!
intestine
ureter
BIOSAMPLE
TYPE
1220 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 142 more…
tissue
lung
1
33
17
16
1
left lung
26
13
13
right lung
22
1
11
11
pigmented layer of retina
20
upper lobe of left lung
7
1
3
3
1
1
+ See 18 more…
cell line
A549
21
1
19
18
2
1
EndoC_BH1
8
8
1
3
1
IMR-90
2
1
2
1
2
1
PC-9
2
1
2
1
1
1
WI38
5
1
1
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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