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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
367
candidate regulatory elements
285
gene expression
260
target gene predictions
215
accessible chromatin
189
chromatin state
94
differential activity
54
binding sites
49
variant allelic effects
35
histone modifications
6
eQTL
2
caQTL
Date released
550
September, 2022
363
February, 2021
160
September, 2023
127
November, 2021
75
February, 2024
38
March, 2023
38
May, 2021
37
June, 2020
35
August, 2021
26
May, 2020
20
January, 2021
19
January, 2020
10
February, 2020
10
March, 2020
10
October, 2022
8
April, 2020
6
August, 2018
5
March, 2024
5
October, 2019
4
August, 2017
2
February, 2023
2
January, 2022
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
Available data
980
bed bed3+
358
tsv
185
bed bed9
179
bigWig
90
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1556
Homo sapiens
Biosample type
842
primary cell
515
tissue
178
cell line
21
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1239
AMP
160
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
1168
hg19
386
GRCh38
organ_slims!
eye
BIOSAMPLE
TYPE
1556 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
7
15
2
2
1
1
2
hepatocyte
1
13
3
8
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 153 more…
tissue
kidney
29
7
14
10
16
1
1
2
1
lung
33
1
17
16
1
left lung
26
13
13
right lung
22
11
1
11
right kidney
20
10
1
10
1
+ See 31 more…
cell line
A549
21
19
1
18
2
1
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
+ See 25 more…
in vitro differentiated cells
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 4 more…
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