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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
214
accessible chromatin
161
gene expression
128
target gene predictions
109
candidate regulatory elements
58
chromatin state
43
binding sites
41
variant allelic effects
30
differential activity
29
histone modifications
3
eQTL
2
caQTL
Date released
201
February, 2021
166
September, 2022
September, 2023
127
November, 2021
77
February, 2024
38
March, 2023
34
May, 2021
27
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
565
bed bed3+
176
bigWig
170
tsv
78
txt
55
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
818
Homo sapiens
Biosample type
664
primary cell
79
tissue
49
cell line
26
in vitro differentiated cells
Organ
794
epithelium
512
kidney
463
brain
441
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
255
heart
244
limb
231
vasculature
218
bodily fluid
215
embryo
207
blood
204
skin of body
184
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
662
AMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
623
hg19
240
GRCh38
month_released!
September, 2023
BIOSAMPLE
TYPE
818 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
differential activity
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
9
7
2
2
1
1
2
hepatocyte
8
13
3
1
1
1
2
4
epithelial cell of proximal tubule
1
16
1
2
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 115 more…
tissue
pigmented layer of retina
20
Peyer's patch
1
3
7
3
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
germinal center
1
1
1
+ See 18 more…
cell line
EndoC_BH1
8
8
1
1
3
GM18507
1
2
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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