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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
270
gene expression
222
accessible chromatin
98
differential activity
80
target gene predictions
63
candidate regulatory elements
46
binding sites
45
variant allelic effects
30
histone modifications
18
eQTL
9
chromatin state
5
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
219
February, 2021
September, 2022
155
September, 2023
128
November, 2021
80
February, 2024
51
March, 2023
42
May, 2021
31
August, 2021
28
June, 2020
22
January, 2021
20
May, 2020
18
January, 2020
15
November, 2022
14
March, 2020
12
February, 2023
11
February, 2020
7
April, 2020
7
August, 2018
6
August, 2017
6
October, 2019
6
October, 2022
4
January, 2022
2
March, 2024
2
May, 2022
2
November, 2019
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
Available data
493
bed bed3+
350
tsv
184
bigWig
78
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
2
bed bed9
Organism
892
Homo sapiens
Biosample type
702
primary cell
125
tissue
42
cell line
23
in vitro differentiated cells
Organ
798
epithelium
427
kidney
338
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
578
AMP
155
KPMP
128
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
510
hg19
202
GRCh38
month_released!
September, 2022
BIOSAMPLE
TYPE
892 results
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Clear Filters
gene expression
accessible chromatin
differential activity
target gene predictions
candidate regulatory elements
binding sites
variant allelic effects
histone modifications
eQTL
chromatin state
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
2
1
2
4
epithelial cell of proximal tubule
16
1
1
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
glomerular endothelial cell
14
2
1
1
+ See 149 more…
tissue
islet of Langerhans
11
5
1
2
1
1
13
3
2
2
2
pigmented layer of retina
20
pancreas
5
3
3
1
1
1
1
1
body of pancreas
2
1
4
1
1
3
breast epithelium
1
1
3
+ See 20 more…
cell line
EndoC_BH1
8
8
3
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
Panc1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 4 more…
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